BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029G11LP1|AL429117
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1770 0.0
>3x_Contig1264
Length = 6524
Score = 1770 bits (892), Expect = 0.0
Identities = 896/898 (99%)
Strand = Plus / Plus
Query: 1 gatcaaaggtccttgttgttcacaaatccactatccaaagattggccgatggtttgttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3873 gatcaaaggtccttgttgttcacaaatccactatccaaagattggccgatggtttgttcg 3932
Query: 61 ttgacgttgccaagaaattgtcttctgaataccctgacatcgaactacaaactgaattgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3933 ttgacgttgccaagaaattgtcttctgaataccctgacatcgaactacaaactgaattgc 3992
Query: 121 tagataacaccgtcttgaagactgtccaacacccagaagcctacgatgatgtcgttgtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3993 tagataacaccgtcttgaagactgtccaacacccagaagcctacgatgatgtcgttgtcg 4052
Query: 181 tttgtccaaacttgtacggtgatatcttgtccgatttgaactccggtttgtccgctggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4053 tttgtccaaacttgtacggtgatatcttgtccgatttgaactccggtttgtccgctggtt 4112
Query: 241 ctctaggtttgactccatccgctaacattggtcacaccgtttctatcttcgaagctgtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4113 ctctaggtttgactccatccgctaacattggtcacaccgtttctatcttcgaagctgtcc 4172
Query: 301 acggttctgccccagatattgctggtcaaaacaaggctaacccaactgccttgttgctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4173 acggttctgccccagatattgctggtcaaaacaaggctaacccaactgccttgttgctat 4232
Query: 361 cctctgtcatgatgttgaaccacatgggtttgactgaacacgccgacaagattgaaaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4233 cctctgtcatgatgttgaaccacatgggtttgactgaacacgccgacaagattgaaaagg 4292
Query: 421 ctgtcttgaccaccattgcttctgatgctaagaacagaactggtgacttgggtggttctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4293 ctgtcttgaccaccattgcttctgatgctaagaacagaactggtgacttgggtggttctg 4352
Query: 481 cttccacatcttctttcactgatgctgtcattgaaagattataaacgaaatttaccaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4353 cttccacatcttctttcactgatgctgtcattgaaagattataaacgaaatttaccaaat 4412
Query: 541 ttcaaggattcaaatataaaactacaatgaaacgacataactataaaataactttttaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4413 ttcaaggattcaaatataaaactacaatgaaacgacataactataaaataactttttaac 4472
Query: 601 tttctgaaagcatcgttttgtggttgattatattacatattcaaaccgttatcataaaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4473 tttctgaaagcatcgttttgtggttgattatattacatattcaaaccgttatcataaaca 4532
Query: 661 tataatagaaacacaaactaccagtaacaaacaatgacactttacgaattttcattctag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4533 tataatagaaacacaaactaccagtaacaaacaatgacactttacgaattttcattctag 4592
Query: 721 tctgttttcagtggatcattggtagaaatgtggtggctagctttccaatcgaaatcccgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4593 tctgttttcagtggatcattggtagaaatgtggtggctagctttccaatcgaaatcccgg 4652
Query: 781 aatatataacacataaagtacgaatgaaccaatacacatttgatgatattccatagtaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4653 aatatataacacataaagtacgaatgaaccaatacacatttgatgatattccatagtaaa 4712
Query: 841 cttttgaatggagatccagtgtaattcctgaaagttgatcgaatcattgtccacyttc 898
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 4713 cttttgaatggagatccagtgtaattcctgaaaggtgatcgaatcattgtccaccttc 4770
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6916
Number of Sequences: 1807
Number of extensions: 6916
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)